Training materials
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Refining Genome Annotations with Apollo (prokaryotes)
gmod prokaryote microgalaxy jbrowse1 biodiversity apollo2 prokaryote -
Bacterial Genome Annotation
gmod illumina bacteria microgalaxy jbrowse1 prokaryote -
Genome annotation with Prokka
gmod prokaryote microgalaxy jbrowse1 prokaryote -
Making sense of a newly assembled genome
gmod prokaryote microgalaxy jbrowse1 -
CRISPR screen analysis
genome editing CRISPR essential genes cell line eukaryote -
Long non-coding RNAs (lncRNAs) annotation with FEELnc
eukaryote eukaryote -
Functional annotation of protein sequences
eukaryote biodiversity eukaryote -
Essential genes detection with Transposon insertion sequencing
bacteria tnseq essential genes microgalaxy prokaryote -
Comparative gene analysis in unannotated genomes
evolution annotation vgp cookbook eukaryote prokaryote microgalaxy biodiversity -
Bacterial pangenomics
work-in-progress