Training materials
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Parameter tuning and optimization - Evaluating nuclei segmentation with Galaxy
Parameter optimisation Validation advanced -
Quantification of single-molecule RNA fluorescence in situ hybridization (smFISH) in yeast cell lines
IDR dataset Spot detection Rasterisation Overlay analyses -
Using BioImage.IO models for image analysis in Galaxy
Image segmentation Image annotation Deep learning analyses -
Overview of the Galaxy OMERO-suite - Upload images and metadata in OMERO using Galaxy
Data management Data handling Data sharing introduction -
Genome annotation with Maker
gmod eukaryote jbrowse1 maker eukaryote -
Refining Genome Annotations with Apollo (eukaryotes)
gmod eukaryote cyoa jbrowse1 apollo2 biodiversity eukaryote -
Genome annotation with Maker (short)
gmod eukaryote maker jbrowse1 eukaryote -
Genome annotation with Funannotate
gmod eukaryote jbrowse1 biodiversity eukaryote -
Creating an Official Gene Set
gmod apollo2 work-in-progress -
InterMine integration with Galaxy
gmod intermine analyse