Training materials
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Calling variants in non-diploid systems
prokaryote microgalaxy introduction -
From NCBI's Sequence Read Archive (SRA) to Galaxy: SARS-CoV-2 variant analysis
covid19 virology one-health -
Somatic Variant Discovery from WES Data Using Control-FREEC
human-genetics-cancer -
Microbial Variant Calling
prokaryote microgalaxy gmod jbrowse1 introduction -
Mutation calling, viral genome reconstruction and lineage/clade assignment from SARS-CoV-2 sequencing data
covid19 virology one-health -
Calling variants in diploid systems
introduction -
Identification of somatic and germline variants from tumor and normal sample pairs
human-genetics-cancer -
M. tuberculosis Variant Analysis
prokaryote one-health microgalaxy tuberculosis -
Pox virus genome analysis from tiled-amplicon sequencing data
virology one-health -
Trio Analysis using Synthetic Datasets from RD-Connect GPAP
cyoa human-genetics-cancer